Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015928521.1_cds_XP_016476069.1_67938
CDS Infomation

[gene=LOC107797675] [db_xref=GeneID:107797675] [protein=uncharacterized protein LOC107797675 isoform X3] [protein_id=XP_016476069.1] [location=join(25116..25412,26639..26697,26878..26959,27132..27199,27697..27766,28197..28278,28651..28715,29216..30241,30412..30474,30558..30604,31036..31081,31187..31266,31787..31900,32016..32097,32483..32545)] [gbkey=CDS]
Sequence

ATGGCTACTCTGCAAACTCATCTCCACTTTCCCATTTCTTCTTCACCAAGATTGCTTCTT
TTCAAGAACCCCAATTCAGTTTCCTTTTCCAAAAAACTATTTTTCTCCAAAAAAATTAAT
GGGTTTTTGAATTATCCAAAATTTGGTGCTAAAGAATTGTTCTGTTGTAATTGTCAAGCT
AGTGGTGAGATTATACCGTTTTCATCAGCTGAAAAGGAGAATGAAAGGCCTCCTTTTGAT
ATTAATTTGGCTGTCATTCTTGCTGGTTTTGCTTTTGAAGCTTACGCTAGTCCTCCAGAT
AATGTCGGAAAGCGTGAGGTGGATGCAGCTAACTGCAAAACCATACTTCTTTCAGAGTCA
TTTGTGCGTGAAATTTATGATGGCCAGTTGTTCATAAAGTTAAAGAAAGGTTTCAGTTTT
CCTGCTATGGATCCTTGGGGAACGAGTGATCCGTACGTGGTGTTACAATTAGATAGTCAA
GTTCTGAAAAGCAAGGTGAAATGGGGGACAAAAGAGCCAACATGGAATGAGGAGTTTGCT
TTAAATATTAAGCAGCCGCCTCTGAATGATCTTCAGCTTGCAGCTTGGGATGCAAATCTT
GTGGCTCCACATAAACGCATGGGGAATGCAGCAGTTAATGTGAAACACCTCTGTGATGGA
GAATCTCATGAACTGCTGGTTGATTTGGAAGGAATGGGCGGTGGTGGGAAGATAGAGATA
GAGATACAGTACAAGAGTTTTGAGAAAATTGAAGAAGAAAAGAAGTGGTGGAGAATCCCA
ATCATTACAGAATTTTTAAAGAAAAACGGGTTTGAGTCTGCTTTGAAGACAATTCTGGGT
TCGGAGACTGTGCAAGCTCGACAATTTGTACAGTTTGCTTTTGGGCAGCTGAAGCTACTA
AATGATGCATATAATGATTCGAATAGCAGCATTGAGAATTCTGATGGTGCTATTGTGGAA
TCAGATGTACAGTCGGGGTCGCAGAAATCACCCAACTCAAGCATGCCTCAAGAATCAAAA
CGCTCAAATAATTCGGAAAACACCAAAGTTGGTGGTGAGATGGAGTTTAATCATGATGAA
AATGACATATCCGTTGAGCATAATTCTGCTGGCACTATGTTTTTTCAGAGCTCTCAATCA
GATAAGCATTTCTGGAAGAATTTTGCTGATATCGTCAATCAAAATGTTGTTCAAAGACTT
GGTCTCCCCGCTCCTGAGAAAATAAAATGGGATAATCTTGACTTGTTAAATAAGATTGGG
GTGCAATCGCGGAAAGTTGCAGATGCAGGATATGTTGAATCAGGTCTTGCAACTCCTGAA
AAGCAAGAAACCGCTAATGGTAGTGCATCAGCTGAACCTCCTGTTCATAACAACATTCAA
TCATCGCTTCCAGATATCAAGAAGGTGACACAAGACTTATTACGTCAAACCGATTCCATT
TTGGGAGCATTGATGGTCCTAAACGCCACAGTTTCCCAATTCAGCAAAGGCGCAGGTTTT
TTCGGAAAGGGTGATGCTAAAGAAGATTCTTCAACCGGACTGGAAAATGATATCCTTGGA
TATCCCATGAATAAAGATGGATTAGTGTTGGACGAGAAGAAAGCCGAGGAGATGAGGTCT
CTTTTCTCAACAGCAGAGACAGCCATGGAAGCTTGGGCACTGCTAGCTACTTCTTTGGGA
CATCCGACTTTCATCAAATCTGAATTTGACAAATTATGCTTCTTAGATAACGAGTCAACT
GACACACAGGTAGCACTCTGGCGTGATTCAGCAAGGAAACGGTTAGTTGTTGCTTTCAGG
GGAACAGAACAAACTAAATGGAAGGATCTTCTGACAGACTTGATGCTAGTTCCTGCAGGG
TTCAATCCTGAAAGGATAGGTGGTGACTTCAAGCAAGAAGTTCAGGTTCACAGTGGTTTC
CTAAGTGCGTATGACTCAGTTAGGATTAGGCTTATCTCGCTGGTCAAACAAGCAATTGGC
TATAGAGATGATGATCTTGACCCACCAAATGAATGGAGTGTTTACGTTACTGGTCATAGT
CTTGGTGGTGCATTGGCTACTCTTCTCGCTCTTGAACTATCATCAAGTCAATTAGCTAAG
CGGGGAGCTATCTCTGTGACCATGTACAACTTTGGATCTCCAAGAGTTGGAAACAAAAAG
TTCGCTGAAGTTTATAATGAGTCTCGATGCAGAGAACATAGTCCAAATTTTCCACCAGTG
CCAATTGGCAACAAAATTTTCTGA

Peptide Sequence

PEP ID

XP_016476069.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107797675 isoform X3 [Nicotiana tabacum]
Sequence

MATLQTHLHFPISSSPRLLLFKNPNSVSFSKKLFFSKKINGFLNYPKFGAKELFCCNCQA
SGEIIPFSSAEKENERPPFDINLAVILAGFAFEAYASPPDNVGKREVDAANCKTILLSES
FVREIYDGQLFIKLKKGFSFPAMDPWGTSDPYVVLQLDSQVLKSKVKWGTKEPTWNEEFA
LNIKQPPLNDLQLAAWDANLVAPHKRMGNAAVNVKHLCDGESHELLVDLEGMGGGGKIEI
EIQYKSFEKIEEEKKWWRIPIITEFLKKNGFESALKTILGSETVQARQFVQFAFGQLKLL
NDAYNDSNSSIENSDGAIVESDVQSGSQKSPNSSMPQESKRSNNSENTKVGGEMEFNHDE
NDISVEHNSAGTMFFQSSQSDKHFWKNFADIVNQNVVQRLGLPAPEKIKWDNLDLLNKIG
VQSRKVADAGYVESGLATPEKQETANGSASAEPPVHNNIQSSLPDIKKVTQDLLRQTDSI
LGALMVLNATVSQFSKGAGFFGKGDAKEDSSTGLENDILGYPMNKDGLVLDEKKAEEMRS
LFSTAETAMEAWALLATSLGHPTFIKSEFDKLCFLDNESTDTQVALWRDSARKRLVVAFR
GTEQTKWKDLLTDLMLVPAGFNPERIGGDFKQEVQVHSGFLSAYDSVRIRLISLVKQAIG
YRDDDLDPPNEWSVYVTGHSLGGALATLLALELSSSQLAKRGAISVTMYNFGSPRVGNKK
FAEVYNESRCREHSPNFPPVPIGNKIF

Transcript Sequence

Gene sequence data has not been registered.